Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFKKGVILDAKSVGLKALEVLKEVADFDFYEVTSPNQIVERSIEAEI--MVLNKVVITQEVLSQLPKLKLICITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYSQSDIFTHISDIKMGL--IKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSP--KDKKEE---YERL-SLEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILETKDLYYAS-DVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
4LCJ Chain:D ((25-314)) | --------LLDGRDCTVE-MPILKDLATVAFCDAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQS--VEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPL--KDAPNLICTPHTAW-YSEQASLEMREAAATEIRRAITGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156402 for 2118 contacts (-73.8/contact) +
2D Compatibility (PS) -30096 + (NN) -9169 + (LL) 800
1D Compatibility (HY) -21600 + (ID) 4850
Total energy: -221317.0 ( -104.49 by residue)
QMean score : 0.572
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