Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIHICCSV----------DNLYFLKKAKEAFAGEKIVGFFYNPNIHPYSEYLLRLEDVKRTCEMLGIELLEGDYELEKFLDKAKGKELLGEKSERCFECFDLRLEASALKAFELGEEKFTTTLLTSPKKDPNQLIAKGQHIAQRHNLEFVVFRNDNFEHFKSELDLNLQALARENELYRQNYCGCQFALKIQKESQNRSPFELYSPLKRQILPASIEERTQVFRELDAAKKDANK---------PFLAQ--KTIATYRLLNGGVWLSKNSNPLDCCILA----RSKSKAKVRINDLRWVFSQR-----------LSALVGYSQRDETLFLTLEGLNTLMAKNYDNLKELNLNPLSYEEELSLRALVSGSESINP-----IIVLEERTEKTLFVEIK----SIFQEEKVFYLL |
4OJV Chain:A ((1-369)) | MVVFEITILGANGGPTEYGTQCFILKPARTE--DPELIAVDGGAGMYQLREMLVQGDDELVPS------FYEHDREPIEFFIDSKLNIQKG-------------LSKSLLQSLKRQGEHFES----ANTMKKTYEVFQG--------ITDYYITHPHLDHI-SGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKH----------VFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHL-----SPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISIALEGHTLFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77867 for 2391 contacts (-32.6/contact) +
2D Compatibility (PS) -32701 + (NN) 1918 + (LL) 3844
1D Compatibility (HY) -13600 + (ID) 2750
Total energy: -121156.0 ( -50.67 by residue)
QMean score : 0.193
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