Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -METIEWNEEQRKAFQDLLRE----FVALIDAKVQEKKQMGKKPKIPKYASCQNGLNKFLAPWGYACKISLG-------TGLLSHEPSIAFCRQDI--LGEGFVNGEKPTPTKGFYLWFAYYWRNDLEKIDLCI--GRSDEEDKKEECQKCLAYDKIIPNRNECYREL------------------------------------------- |
| 3A1Y Chain:G ((1-284)) | MAHVAEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKTVAIEAGYITKETIQDIIGRAFRAMLLLAQQLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32121 for 938 contacts (-34.2/contact) +
2D Compatibility (PS) -15867 + (NN) -1689 + (LL) 0
1D Compatibility (HY) -800 + (ID) 750
Total energy: -51227.0 ( -54.61 by residue)
QMean score : 0.185
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