Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRNEVLLNGDINFKEVRCVGDNGEVYGIISSKEALKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIAQN-DINYKVKHAREFIES-NKHV-KFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGENHAKNED |
| 2JVF Chain:A ((14-87)) | ---------------------------------------------------------------------------------------EIEIDIRVSTGKELERALQELEKALARAGARNVQITISAE-----NDEQAKELLELIARLLQKLGYKDINVRVNGTEVKIEVRV----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11467 for 363 contacts (-31.6/contact) +
2D Compatibility (PS) -7581 + (NN) 601 + (LL) 7924
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -13723.0 ( -37.80 by residue)
QMean score : 0.527
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