Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKYHSDQEYEEIITDQLGDMQLRENLRSAMDTLRANRKNLLKNRYSEWENLRELGKEVKLKILSRLDEYLELFEKNATQNGFKIHYAKDGDEANEIIYNLAKEKNIKRILKQKSMASEEIGLNHYLKEKGIQAQETDLGELIIQLINEHPVHIVVPAIHKNRKQIGKIFEEKLNAAYEEEPEKLNAIARKHMRKEFESFKMGISGVNFAIANEGAIWLVENEGNGRMSTTACDVHVAICGIEKLVESFDDAAILNNLLAPSAVGVPITCYQNIITGPRKNDDLDGPKETHIILLDNNRSNILADEKYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVS--PQLF----G----LN--NYGHIPNLCSLCGRCTEVCPVEIPLAELIRDLRSDKVGEGRGVVKGAKSTQHSGMEKFSMKMFAKMASDGTKWRFQLKMAQFFSPLGKLLAPILPLVKEWASVRTLPNMDTSLHAKVQHLEGVIYE |
| 1KF6 Chain:B ((142-236)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YHQFSGCINCGLCYAACPQFGLNPE------FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70218 for 602 contacts (-116.6/contact) +
2D Compatibility (PS) -8528 + (NN) -680 + (LL) 28452
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -53624.0 ( -89.08 by residue)
QMean score : 0.436
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