Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSEFHQVYDPLGNIWLSALVALLPILLFFLSL--MVFKLKGYTAAFLSVALSAIIAVLVYKMPVSMVGSSFLYGFLYGLWPIAWIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVILIGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLCLIANTA--PVAFGAVGIPISAMASAVGVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAGAQFLSSNYLGPELPGIISALVSLVATALFLKFWQPKTIFRSDGKAISFTKTNHHICKIYVAWSPFVILVLVIVLWIQPFFKALFEKDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVNFPVVFKLLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLKEMRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAF-TFFSPLIGWV--GVFLTGSDTSSNLLFGSLQQLTAQRLHLPEVLTLTANTVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIMG-VVISAIAYWIPEVVPAIK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 3W3W Chain:A ((3-1077)) | ALPEEVNRTLLQIVQAFASDNQIRSVAEKALSEEWITENNIEYLLTFLAEQAAFSQDTTVAALSAVLFRKLALKAPITHIRKEVLAQIRSSLLKGFLSERADSIRHKLSDAIAECVQDDLPAWPELLQALIESLKSGNPNFRESSFRILTTVPYLITAVDINSILPIFQSGFTDASDNVKIAAVTAFVGYFKQLPKSEWSKLGILLPSLLNSLPRFLDDGKDDALASVFESLIELVELAPKLFKDMFDQIIQFTDMVIKNKDLEPPARTTAL-ELLTVFSENAPQMCKSN--------QNYGQTLVMVTLIMMTEVSIDDDDAAEWIESDDTDD------------------EEEVTYDHARQALDRVALKLGGEYLAAPLFQYLQQMITSTEWRERFAAMMALSSAAEGCADVLIGE------------IPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFS---------PFIQRTAHDRILPALISKLTSECT-----------SRVQTHAAAALVNFSEFAS-----KDILEPYLDSLLTNLLVLLQSNK----LYVQEQALTTIAFIAEAAKNKFIKYYDTLM------PLLLNVLKVNSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDALRSYLEQSWSRICRILGDDFVPLLPIVIPPLLITAKATQDVGLIEEEEAANFQQYPDWDVVQVQ--------GKHIAIHTSVLDDKVSAMELLQSYATLLRGQFAVYVKEVMEEIALPSLDFYLHDGVRAAGATLIPILLSCLLAAEELVLLWHKASSKLIGGLMSEPMPEITQVYHNSLVNGIKVMGDNCLSEDQLAAFTKGVSANLTDTYERMQDRDEYNEDFTDEDLLDEINKSIAAVLKTTNGHYLKNLENIWPMINTFLLEPILVIFALVVIGDLIQYEQTASMKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAPSTYADVCIPTLDTLVQIVDGSKLEENRSSTENASAAIAKILYAYNSNIPDTYTANWFKTLPTITDKEAASFNYQFLSQVCAQSNISAVVDSVIQALNERSLTVISSVKKLLGFLPSSDAMAIFNRYPADIMEKVHKWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -463053 for 3848 contacts (-120.3/contact) +
2D Compatibility (PS) -46974 + (NN) 2929 + (LL) 6156
1D Compatibility (HY) -18400 + (ID) 3400
Total energy: -522742.0 ( -135.85 by residue)
QMean score : 0.211
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