Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYI-------------------------AGEYGVFGRLRPLHTNAVIYGFTLGGIW-ASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGL-------TQS-KEYAELMW-----PLDIIVV------VAWVLWGVNMFGSMSVRRENTI-----YVSLWYYIATYVGIAVMYIFNNLSIPTYFVA------DMGSVWHSISMYSGSNDALIQ---WWWGHNAVAFVFTSGVIGTIYYFLPKESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIKFLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKALIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLERE-PNY--ATPMAR |
| 2GSM Chain:A ((24-538)) | -------TNHKDIGVLYLFTGGLVGLISVAFTVYMRMELMAPGVQFMCAEHLESGLVKGFFQSLWPSAVENCTPNGHLWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGA---PDMAFPRMNNLSYWLYVAGTSLAVASLFAPGGNGQLGSGIGWVLYPPLSTSESGYSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLI-------LLALPVLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEV-YIIVLPAFGIVSHVIATFAKKPIFGYLPMVYAMVAIGVLGFVVWAHHMYTAGLSLTQQSYFMMATMVIAVPTGIKIFSWIATMWGG--SIELKTPMLWALGFLFLFTVGGVTGIVLSQASVDRYYHDTYYVVAHFHYVMSLGAVFGIFAGIYFWIGKMSGR-QYPEWAGKLHFWMMFVGANLTFFPQHFLGR-QGMPRRYIDYP-----------EAFATWNFVSSLGAFLSFASFLFFLGVIFYTLTRGARVTANNYWNEHADTLEW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -430340 for 3892 contacts (-110.6/contact) +
2D Compatibility (PS) -44776 + (NN) 2052 + (LL) 2852
1D Compatibility (HY) -29600 + (ID) 4400
Total energy: -504212.0 ( -129.55 by residue)
QMean score : 0.290
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