Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSARPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPF---LWGSKRIGPDLHRVGDYRTTDWHEKHMLDPKSVVPHSIMPAYKHLFIKKSDFDTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
| 1QN2 Chain:A ((3-99)) | -----------------------------------------------DAAAGEKAF--APCKACHNFEKNGVG--------PTLKGVV--GAKAGEGADGY-AFSDALKKSGLTWDQADLKQWLADPKKKVPGTKMV-FPGISD-PKKVDDIIAYLKTK---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QN2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25139 for 651 contacts (-38.6/contact) +
2D Compatibility (PS) -9722 + (NN) -2195 + (LL) 11044
1D Compatibility (HY) 1200 + (ID) 950
Total energy: -25762.0 ( -39.57 by residue)
QMean score : 0.115
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