Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKNFWPLGIMSVL---IFGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFSVGLKPLTESPKTPILPYFSKGTHGDKKIQENLLNNALILEKSNTLYAQLQPLKPALDSPNIQVYLAFYPSQSQPRLLGTLDCKNACEPLKFDLLEGDKVGRYKILFKFVFKNKEELILEQLAFFK |
4RLC Chain:A ((16-175)) | QGQNSVEIEAFGKRYFADLYGGSIGYFL-------TDDVELALSYGEYH-----DVVHGNLTSLDAIYHFG--------TPGVGLRPYVSAGLAHQNITNINSDSQGRQQMTMANIGAGLKYYFT-------------------ENFFAKASLDGQYGLEKGEWMAGLGVGFNF---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11187 for 956 contacts (11.7/contact) +
2D Compatibility (PS) -13327 + (NN) 7169 + (LL) 5524
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 6753.0 ( 7.06 by residue)
QMean score : -0.138
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