Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVLGSTGSIGKNALKIAKKF--GVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNL-EPLGAEVFVGLDGIDAMIEECV--SNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAGHLL------DISQITPVDSEHFGLWALLQNKTLK-PKSLIISASGGAFRDTPLDLIAIQNAQNALKHPNWSMGDKITIDSASMVNKLFEILETYWLFGASL-KIDALIERSSIVHALVEFEDNSVIAHLASADMQLPISYAIN-PKLASLSASIKPLDLYALSAIKFEPISVERYTLWRYKDLLLENPKLG----VVLNASNEVAMKKFLNQEIAFGGFIQIISQALELYAKKSFKLSSLDEVLALDKEVRERFGSVARV |
| 1R0K Chain:C ((7-376)) | VTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAV-------GAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPK--RMETPAESLDFTKLRQMDFEAPDYERFPAL---TLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPAT--PSSLEDVFAIDNEARIQAAALMES |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -215977 for 2971 contacts (-72.7/contact) +
2D Compatibility (PS) -36221 + (NN) -6556 + (LL) 996
1D Compatibility (HY) -25600 + (ID) 6400
Total energy: -289758.0 ( -97.53 by residue)
QMean score : 0.430
|
|
|