Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWVLKGVYFDEC-LKKGKNHIITTVAEHPAVRSTCNFL-ESLGVEVTYLPINEHGSITADQVKEAIT--EKTALVSVMWANNETGLIFPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSGTLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALL-KIPDVMVVG-DRVHRVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
4ISY Chain:D ((14-385)) | -----YLDHAATTPMHPAAIEAMAAVQRT-IGNASSLHTSGRSARRRIEEARELIADKLGARP-SEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGS--------PSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALAA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -205020 for 3236 contacts (-63.4/contact) +
2D Compatibility (PS) -39166 + (NN) -17009 + (LL) 1680
1D Compatibility (HY) -25200 + (ID) 7200
Total energy: -291915.0 ( -90.21 by residue)
QMean score : 0.517
|
|
|