Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILRASVLSALLLVGLGAAPKHSVSASDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKMVVIEDPDTKYNIPLVVSKDGNLVIGLSNIFFSNKSDDVKLVAETNQKIQALNATQQNSAKLNAIFNEIPADYAIELPSTNAENKDKILYIVSDPMCPHCQKELTKLRDHLKENTVRMVVVGWLG--VNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTKVENTTKKIFESGVIKGVPFLYHYKA |
3GV1 Chain:A ((5-118)) | --------------------------------------------------------------------------------------------------------------------------------------KAIKE-VRG--NGKLKVAVFSDPDCPFCKRLEHEFEKM-TDVTVYSFMMPIAGLHPDAARKAQILWC----QPD----R---AKAWTDWMRKGKF-PVG--GSICDNPVAETTSLGEQFGF-NGTPTLVFPNG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -46477 for 821 contacts (-56.6/contact) +
2D Compatibility (PS) -11891 + (NN) -2257 + (LL) 11260
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -52065.0 ( -63.42 by residue)
QMean score : 0.507
|
|
|