Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQ-NAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVL-WSENL------KMDSLEILKDP-KIKRIAMANPKLAPYGKASMEVLDRLK-------LTPSLKS-----------------------------KIIYGASISQAHQFIATKNAQIGFGALSLIDKKDK---------------------NLSYFIIDKTL--YNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3CIJ Chain:A ((5-295)) | ---------------------VKLKVFHAGSLTEPMKAFKRAFEEKHPNVEVQTEAAGSAATIRKVTELGRKADVIATADYTLIQKMMYPEFANW-TIMFAKNQIVLAYRNDSRYADEINSQNWYEILKRPDV-RFGFSNPNDDPCGYRSLMAIQLAELYYNDPTIFDELVAKNSNLRFSEDNGSYVLRMPSSERIEINKSKIMIRSMEMELIHLVESGELDYFFIYKSVAKQHGFNFVELPVEIDLSSPDYAELYSKVKVVLANGKEVTGKPIVYGITIPKNAENRELAVEFVKLVISEEGQEILRELGQEPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88534 for 1917 contacts (-46.2/contact) +
2D Compatibility (PS) -24412 + (NN) -11306 + (LL) 2624
1D Compatibility (HY) -12400 + (ID) 2150
Total energy: -136178.0 ( -71.04 by residue)
QMean score : 0.568
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