Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCHNL-----PRVPIDILLGGPPCQSYSTLGKRKMDEKANLFKEYLRILDLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILE-HAILNALDYGVPQVRERVILVGALKSFKQKF-YF----PKP-IKTHFSLKDALGDLPPIQSGENGDALGYLK---NA--DNVFLEFVRNSKEL-SEHSSPKNNEKLIKIMQ-TLKDG--QSKDD-----LPESLRP-KSGYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSANAKRLQIGNAVPPLLSAALAHAVFDFLRGKNV |
| 3G7U Chain:A ((2-369)) | SLNVIDLFSGVGGLSLGAAR-AGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQGFS------DDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYS-GIRNKAFNLVSGDYDILDPIKVKASDYGAPTIRTRYFFIGVKK---SLKLDISDEVFMPKMIDPVTVKDALYGLPDIIDANWQSDSESWRTIKKDRKGGFYEKLWGQIPRNVGDTE-------SIAKLKNNIISGCTGTLHSKIVQERYASLSFGETDKISRSTRLDPNGFCPTL---------VRPIHPYHPRVITPREAARLQGFPDWFRFHVTKWHSFRQIGNSVSPIVAEYILKGLYNLLNE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102284 for 2754 contacts (-37.1/contact) +
2D Compatibility (PS) -33772 + (NN) -10803 + (LL) 728
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -165581.0 ( -60.12 by residue)
QMean score : 0.428
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