Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTR--YDG---MSFNAFKEYKKRVF-AKNEKKNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQ-QNKLSYSSNSQKELYVEIENNQASIIMEK |
| 3A76 Chain:A ((27-149)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LASRAAIQDLYSDKLIAVDKRQEGRLASIWWDDAEWTIEGIGTYKGPEGALDLANNVLWPMFHECIHYGTNLRLEFVSA----DKVNGIGDVLLLGNLVEGNQSILIAAVFTDEYERRDGVWKFSKRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39489 for 793 contacts (-49.8/contact) +
2D Compatibility (PS) -12657 + (NN) -3586 + (LL) 13108
1D Compatibility (HY) 3200 + (ID) 350
Total energy: -39774.0 ( -50.16 by residue)
QMean score : 0.429
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