Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINNNNNNKKLRGFFLKVLLSLVVFSSYGSANDDKEAKKEALEKEKNTPNGLVYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPVIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLHGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTIESLKKIFYTITCEAVYL |
3CWX Chain:A ((47-176)) | -----------------------------------------------------------------------------EVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPMIEKIF-----EMGLNVEIQINPEVKDFFTFKSISTTNKQRCFLSLRGETREILCDNKLYNMLLAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39980 for 790 contacts (-50.6/contact) +
2D Compatibility (PS) -12122 + (NN) 2382 + (LL) 4404
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -53116.0 ( -67.24 by residue)
QMean score : 0.292
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