Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLENRVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRFKLAGADLVRVAVSNEKDALALKELKKV-----SPLPLIADIHFHYKFALIA----AQSVDAIRINPGNIGSKDK-----IKAVVDACKEKNIPIRIGVNAGSLEKQF-----DQKYG-PTPK--------GMVESAL--YNAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVIYPFHLGVTEAGNLFSSSIKSAMALGGLLMEGIGDTMRVSITGELEN----EIKVARAILRHSGRLKEGINWISCPTCGRIEANLV-DMASKVEKRLS------HIKTP----LDISVMGCVVNALGEAKHADMAIAFGNRS----GLIIKEGKVIHKLAEKDLFETFVIEVENLAKEREKSLKD |
| 2Y0F Chain:D ((5-401)) | ----RRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINP-------EHFAEMIRIAMDLGK----PVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKEPRTKEVEVAQEILQALGLRAFAPEVTSCPGCGRTTSTFFQELAEEVSRRLKERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYVKTRFAPKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169684 for 2578 contacts (-65.8/contact) +
2D Compatibility (PS) -37510 + (NN) -25547 + (LL) 544
1D Compatibility (HY) -22000 + (ID) 6650
Total energy: -260847.0 ( -101.18 by residue)
QMean score : 0.445
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