Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTMNAIRWPKKWIPGETDNFVSNEVIVKGLDFNKVVQHLRDASHWEKYYKNSGNIHMYHQDNTILKDKTRFCFETF-GF---LVEAEVEEFELKDAILRLAWRGWNEAKGDEYL-EVYHAWLVEKLDN---DRVRILTQESQSGVPAKALAKSVPNAMLNGHQAWLDGLVAYSR |
| 3W9R Chain:A ((19-180)) | --TVQYVRTHHQHLCRENQCTSALVK-HIKAPLHLVWSLVRRFDQPQKYKPFVSRCTVIG----DPEIGSLREVNVKSGLPATTSTERLELLDDE--EHILGIKIIGGD---HRLKNYSSILTVHPEIIEGRAGTMVIESFVVDVPQ-GNTKDETCYFVEALIRCNLKSLADVSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39542 for 1137 contacts (-34.8/contact) +
2D Compatibility (PS) -15936 + (NN) 1289 + (LL) 508
1D Compatibility (HY) 800 + (ID) 750
Total energy: -53631.0 ( -47.17 by residue)
QMean score : 0.227
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