Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLVNWQKKNF-----AKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT
1WSF Chain:D ((2-141))
LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCAELARAAAMNPTLEDT
General information:
TITO was launched using:
RESULT:
Template:
1WSF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53233 for 1071 contacts (-49.7/contact) +
2D Compatibility (PS) -14456 + (NN) -7540 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3650
Total energy: -87279.0 ( -81.49 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1WSF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WSF-query.scw
PDB file :
Tito_Scwrl_1WSF.pdb
: