Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKY--FIFLDENHYFYLIEESNMHSKYFAQ-IKE-KKLPPLI--LTH-NGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNRANA---LDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFCFSYVEEPNK-QEFLDFKQKYLDFSRTK-APKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVI-ENEVYLNEINPIPGSLANYLF--------DDFKTTLENLAQ-SLPKTPKIQV-KNSYLLQIQKNK |
| 3TQT Chain:A ((5-366)) | LHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFIDHVGRWYLIDQPEMFLAHSPDHLVKEGSARPITIAFGDAAKPWQSL----RRYSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWHTLSPRDATEGVYQRLLDRW--ELFVKAVSLGSSVATLPVKTETEFTKAVKEVFRYDDRLMVEPRIRG-REIECAVLGNG-APKASLPGEIIPH---------------ATTTTSVDLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTPNNKVLVNEINTIPGFTNISMYPKMWEASGLPCPNLLDQLIELAIDRHQEQQKLIRCYEVKARS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157226 for 2597 contacts (-60.5/contact) +
2D Compatibility (PS) -35008 + (NN) -16899 + (LL) 2116
1D Compatibility (HY) -18000 + (ID) 4300
Total energy: -229317.0 ( -88.30 by residue)
QMean score : 0.422
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