Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMFNFFKKIVNKIKGEEVKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQLEVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHK-KALLGAGDTFRAAAVKQLQLWGEKLNVQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ
3DMD Chain:C ((128-320))------------------------------------------------------------------------------------KPYVIMFVGFNGSGKTTTIAKLANW-LKNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTK------PNLVIFVGDALAGNAIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGYDDLRPFEKEWFLERIFG------


General information:
TITO was launched using:
RESULT:

Template: 3DMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -114975 for 1592 contacts (-72.2/contact) +
2D Compatibility (PS) -20958 + (NN) -10508 + (LL) 8244
1D Compatibility (HY) -16800 + (ID) 4350
Total energy: -159347.0 ( -100.09 by residue)
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_3DMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DMD-query.scw
PDB file : Tito_Scwrl_3DMD.pdb: