Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTVIFVAVLQAALGMLSVRQEICRNPSQPHDFKSLVIVTNFY-------------------------------------------
1JW9 Chain:D ((1-81))
MIKVLFFAQVRELVGTDATEV-----AADFPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG
General information:
TITO was launched using:
RESULT:
Template:
1JW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14105 for 181 contacts (-77.9/contact) +
2D Compatibility (PS) -4256 + (NN) -3181 + (LL) 384
1D Compatibility (HY) -400 + (ID) 300
Total energy: -21858.0 ( -120.76 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_1JW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JW9-query.scw
PDB file :
Tito_Scwrl_1JW9.pdb
: