Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MLEALNALNQLNALHSKNAAHHFNATLPILLKVLEKQDKDLFLLQVGNRIIPTKS--EQELKINQPYFAIMQRNQLGDIVLKNLVPAPKILDALDDLPVIEMKKLKEIL-SAKDNTPLKEYKELLSEKLI-------HAKSSQEFLNTAN-------MLLSLQSQVLSFVVEN--ERKKAFLQMKAKKQSVDFYALY-----PNLGEIGGVIYLKEKEKQLFLKTTLQRTKEVLKEA-QNTLLGFSFVEIVCEKTPMLFAFEDRLLDTLG |
| 4AW9 Chain:A ((1-263)) | GGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIP------------DEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFPNEDLHVKDLNETIHYMYKHKMYRKMVFYIEACESGSMMNHLPDNINVYATTAANPRESSYACYYDEKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTQTSHVMQYGNKTISTMKVMQFQGMKR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23301 for 1838 contacts (-12.7/contact) +
2D Compatibility (PS) -22760 + (NN) 6077 + (LL) 1568
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -41216.0 ( -22.42 by residue)
QMean score : 0.229
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