Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSPVNPIHTNANALNSGAKNEVKDAKNAPKSASKDFSKILNQKISKDKTAP-KESPNHSALKATPKDAKEDAK-ALEKTPTLPHQHAQNLAKDQQAPTLKDWLNHPKTHPTA-----PHEAQHET--HEANETNPKTPNETLSKNEKKPNEVASNAHQTNLPNKNPITPNHANNAIKNPTTPTHNVKDPKTLKDIQTLSQKHDLNASNIQAATTPENKNPLNASDHLALKTTQASINHTLTKNDAKNTANLSSVLQSLEKKEPQNKEHANPPNNEKKTPPLKEALQMNAIKRDKTLSKKKPEKTPIHAKTQTIAPSATPENAPKIPLKTLPLMPLIGANPPPNDNAPTPLEKEEKTKEISDNKEKAKETNSSA--QSVQNTQASDKTSDNKSTTPKETI-RHFTQQLKQEIQEYKPPMSKISMDLFPKELGKVEVTIQKVGKNLKVSVISHNNSLQTFLDNQQDLKNSLNALGFEGVDLSFSQDSSKEQQAPKDQPKEPFKEQELTPLKENALKSYQENTDHENQETSMQITLYA |
| 4NNB Chain:A ((4-527)) | -----TSLYITAAPI--GAVPKFLD----PFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGHAQPIAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPIT-PEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLGVVTVGSQRNQI-------VLDDYDAIVPMVKKREPAAILNLST----------SVRGDRHGARSKLRRAHLKFYDDVGSA----------PEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNAT-----SLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVVREEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLED------GLTVNDARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGI-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 391721 for 3979 contacts (98.4/contact) +
2D Compatibility (PS) -48638 + (NN) -9189 + (LL) 3192
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: 321586.0 ( 80.82 by residue)
QMean score : 0.045
|
|
|