Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIAVFGGGAWGRALAFAFG-------EKNE-VKIISRRDLN-----EPLKKLN------DALISKGSAPIEQVDLER-GLKAALYVIAISVQHLREWFQ--NASLPKNAKVLIASKGIEVL--NKAFVSEIAKDFIDPNALCFLAGPSFAAEIIQGLPCALVIHSNNQALALEFANKT-PSFIRAYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGK---TETFLGLSGAGDLFLTANSILSRNYRVGLGLAQ-NKPLEVVLEE--LGEVAEGVKTTNAIVEIARKYGI--YTPIASELALLLKGKSV-LESMNDLIRRA |
| 1X0V Chain:A ((9-349)) | KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG-IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVDKFPLFMAVYKVCYEGQPVGEFIHCLQNHP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1X0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -168502 for 2669 contacts (-63.1/contact) +
2D Compatibility (PS) -33288 + (NN) -9489 + (LL) 240
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -227789.0 ( -85.35 by residue)
QMean score : 0.469
|
|
|