Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCAGTYKIN----FSDPSAGIYHAYIPSVLKSYGHNNS--PFLRNVMGELLIK-DDAFASEVALKELLYWKTRYHDNLKDMIKSYNKGSRWEKNEKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIEEAQTQKSQEMKEAASEQAIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL |
2NWD Chain:X ((19-102)) | -------------------------------------------------------------------------------GYRGISLAN---WMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWC-NDGKTPGAVNAC-HLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39111 for 542 contacts (-72.2/contact) +
2D Compatibility (PS) -8037 + (NN) -317 + (LL) 15524
1D Compatibility (HY) 2400 + (ID) 650
Total energy: -30191.0 ( -55.70 by residue)
QMean score : 0.195
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