Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAI---PHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEK-DKG-EQRQKEGELIKAFDLPLSLIERTQEC
1XAX Chain:A ((37-146))
-------------------------NEVEMTVRIVDEAESHELNLTYRGKDRPTNVLSFPFECPDEVELPLLGDLVICRQVVEREASEQEKPLMAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGF-----------
General information:
TITO was launched using:
RESULT:
Template:
1XAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44656 for 722 contacts (-61.9/contact) +
2D Compatibility (PS) -11586 + (NN) -4413 + (LL) 3280
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -66175.0 ( -91.66 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1XAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XAX-query.scw
PDB file :
Tito_Scwrl_1XAX.pdb
: