Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSIGSMGKPIEGFLVAAIQFPVPIVNS---RKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLL-DVPGKETELYAKACKEAKVYGVLSIMERNPDSNENPYNTAIIIDPQGKIILKYRKLFPWNPIEPWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYSTQ-VNDQWILTNRSNAWHNLMYTVSVNLAGYDN--VFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENNIYNLGHRGYVAKPGGEHDAGLTYIKDLAAGKYKLPWEDHMKIKDGSIYGYPTTGGRFGK |
| 2VHH Chain:A ((68-358)) | --------RKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAE--AGCNIVCTQEAWTMPFAF------EFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPR-----MEGNTGHPVFETEFG-KLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINRVGTEQFP---FYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFKKASEHGFKPQIIKET--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151327 for 2128 contacts (-71.1/contact) +
2D Compatibility (PS) -27458 + (NN) -15399 + (LL) 2108
1D Compatibility (HY) -6000 + (ID) 2950
Total energy: -201026.0 ( -94.47 by residue)
QMean score : 0.437
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