Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKELGFLGHYHPILLPLESRIK--NEFLHLGLSGANVTLPFKERAFQICDKIKGIALECASVNTLVLENDELVGYNTDALGFYLSLKHQNYQ-NDQNALILGAGGSAKALACGLQKQGLKVSVLNRS-ARGLDFFQRLGCDCFMEPPK--SAFDLIINATSASLHNELP--LNKEVLKGYFKESKLAYDLAYGFLTPFLSLAKELKIPFQDGKDMLIYQASLSFEKFSDSQIPYSKAFEVMRSVF |
2HK9 Chain:D ((15-272)) | -----YGVIGFPVKHSLSPVFQNALI----RYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLI----KKDHVVVDIIYK-ETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146408 for 2117 contacts (-69.2/contact) +
2D Compatibility (PS) -26453 + (NN) -4560 + (LL) 1536
1D Compatibility (HY) -19200 + (ID) 4300
Total energy: -199385.0 ( -94.18 by residue)
QMean score : 0.453
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