Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKQEYKQLPKRAEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCEKICTSNCIRIITHKGED------NRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSEFLTSEQDAKNCSHAEFLGFGAVSPNYNERMQATPLDYVQEPSKEESKEESPTSPESHKGDENV |
2FUG Chain:P ((26-128)) | -----------------------------------------------------YPDAPVALKPRFHGRHVLTRH-PNGLEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDLVYGKEDMLVDVVGTKPQRREAKRTGKPVKVGYVVPYVRPELEGFKAPTEG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51539 for 580 contacts (-88.9/contact) +
2D Compatibility (PS) -10285 + (NN) -4248 + (LL) 4768
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -70454.0 ( -121.47 by residue)
QMean score : 0.417
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