Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYTELKDKSIKELEELLHAKKAELFELRVKLKNMQLSNPNEIKKARRNIARINTAINAYYSSSVE
2WWB Chain:N ((4-66))
VKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRP--SLPKIKTVRKSIACVLTVINEQQREAVR
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6668 for 353 contacts (18.9/contact) +
2D Compatibility (PS) -6852 + (NN) -3876 + (LL) 148
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -6612.0 ( -18.73 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: