Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGFLFEKSLMGFCAHSIKIIKVTGLILSFLAAFLVAEDTHEPEEIKAKVAYVKIPQLEDLENTPVYIGQTIGVTYDLLLFDAEFLEAKIKDGWDKTQIELLNKMPKWKKVEKELFRATYYYKIKGIRASIPSLEVSAFSNKDKYIDHSIAPKVALQVTDLSKNPRYANVMAKDLQVVQYKTKDYDDKNNILVMELAFKEANWEDFHVKEAIKQGFDNASLNQIKAKEGSVFYYCVLPKTLQNLSFDYFSLSNRQFKTLSFSAIPTQDTTGIQSDLIPKNNFLVFSNVALLALCVFFLALFFIFGRKLIFLGLGILCLGFVLYNLLFTQKSALLLAHKKIRILPTQNSTILGLSRDEMPIKILGSHDDYYKILTPHEQIGWVKKDEVK |
2KT8 Chain:A ((10-61)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGAFYKIEY-KGSHGYVAKEYIK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11212 for 299 contacts (-37.5/contact) +
2D Compatibility (PS) -5383 + (NN) 493 + (LL) 26792
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 8140.0 ( 27.22 by residue)
QMean score : 0.409
|
|
|