Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLSALLAFSCAHALSDM-DLIKKAKESQLEPMPMGKALKEYQIKKTRDVGIGAKNSEIMTSAQVELGKMLYFDPRISTSYLVSCNTCHNLGLGGVDLIPSAIGSQWKKNPHLLSSPTVYNSVFNDVQFWDGRVTHLNEQAQGPIQSSFEMGADPKVVVEKINSIPGYVKLFRKAY-GSKVKIDFKLIADSIAMFEATLITP-SRYDDFLRGNPKALSKAEKEGLDLFISKGCVACHNGINLGGTMQ-PFGVV-KPYKFANVGDFKGDKNG----LVKVPTLRNITETMPYFHNGQFWDVKDAIKEMGSIQLGIEISDAEAKKIETFFEALKGKKPKIIYPELPVMTDKTPKPSF |
| 3HQ8 Chain:B ((22-343)) | ----------------------ADELQQRAQGLFKPVPA----KAPTLK-----------GNPASPVKVELGKMLYFDPRLSASHLISCNTCHNVGLGGGDLQATSTGHGWQKGPR--NAPTVLNSVFNTAQFWDGRAKDLAEQAKGPVQAPKEMNNTPDQVVKTLNSIPDYVALFKKAFPGEKDPVTFDNMAKAIEVFEATLITPDSPFDQYLKGKKKALDGKQTAGLKLFLDKGCVACHGGLNLGGTGYFPFGVVEK-------GRFAVTNTAKDEYVFRAPSLRNVAITYPYFHSGVVWSLKEAVAVMGSAQFGIKLSDDESEAIAAFLGSLTGKQPKVVYPIMPASTDATPRPRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59177 for 2360 contacts (-25.1/contact) +
2D Compatibility (PS) -32307 + (NN) -15315 + (LL) 3616
1D Compatibility (HY) -26000 + (ID) 7750
Total energy: -136933.0 ( -58.02 by residue)
QMean score : 0.401
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