Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRATAIKIFSFSSALALLLQGCLSINLKQMLPEIRTYDLNASSFEMTQCPKPLTEVRL---------------------ISILS-----------ADLFNTKEIVFKAQ--DGQITHGKHQKWIDLPRNMLKTM-------------FM----------QEAQKACLGVALPPYGAGAPTYAVRFTILSFSLLEKENSTYRAEFAL--GYDISVKGDSHSGVIIKHENISSLENK-----TTKTSKNGSQ-DFQESAIQSLQHVSTQA-------------MQEAISLIKKAVEAQSVSPLKK |
| 4R1D Chain:B ((1-301)) | MDKTGWITHCFGRFLIDLPPDA-VINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVGVTFPEHPGARFEFRSSTGAELNSLLERVDGFVQNMLSTFAGMETLRKGKHPVGSLPGEEYLVAGSDKGQRGYTFMWEVQGKEESLTEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28232 for 1504 contacts (-18.8/contact) +
2D Compatibility (PS) -23221 + (NN) 3720 + (LL) 240
1D Compatibility (HY) -3600 + (ID) 2150
Total energy: -53243.0 ( -35.40 by residue)
QMean score : 0.120
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