Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQ-TIKLPVSKIAYIG-SYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGN-PKAVEHAKKFGISFLSFQETT--------------------IAEAMQAMQAQATVLEID--ASKKFAKMQETLDFIAERLKGVKKK--KGVELFHKANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWVSPLTPEDVLNNPKFSTIKAIKNKQVYKLPTM-D-I--GGPRA-PLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
3PSH Chain:A ((2-322)) | ---------------------------------RIITDQLDRKVTIPDHINRAVVLQHQTLNIAVQLDATKQIVGVLSNWKKQLGKNYVRLAPELENMAMPGD--LNSVNIESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKKQQGDELVKAAFANRKLLADRLGDVSADKRVRTYMANPDLGTYGSGKYTGLMMEHAGAYNVAAAT-IKGFKQVSLENVLEWNPAVILVQDRYPDVVPQILNDQGWANIQALKDKKVFLMPEYAKAWGYPMPEALALGEVWLAKALYPQRFQDVDLDKMVNDYYQKFYRTSYKPD------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150690 for 2359 contacts (-63.9/contact) +
2D Compatibility (PS) -30852 + (NN) -9884 + (LL) 3832
1D Compatibility (HY) -13600 + (ID) 2850
Total energy: -204044.0 ( -86.50 by residue)
QMean score : 0.533
|
|
|