Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQ-TIKLPVSKIIYLG-SFAEVPAMFNTWDRVVGISDYA--FKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTFVGN----PKAVEHAKKFGISFLSFQEKTIVEVMEDIDAQAKALEV--DASKKLAKMQETLDFIKERLKNVKKKKGVEL--FHKA--N-KISGHQALDSDILEKGGIDNFGLKYV-------KFGRADISVEKIVKENPEIIFIWWISPLSPEDVLNNPKFSTIKAIKNKQVYKLPT-MDIGGPRAP-LISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 3R5T Chain:A ((3-295)) | -----------------------------NVWPRTFQNADGSITTIPSQPKRILSTAVTVTGTLLAIDA--PVIASAATTQSTFFEQWR-KLAELRQVKKLWP--AGSVDLESVYVEQPDLIVVSMIGADSARDQIPLLQA-IAPTILVDYS-DQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDL-P-KGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMTDQQAQAFLHDPILKNLPSIQRKQVYGLGENSFRIDLFSAREIINSLLRRFAGEQAQSLVMPL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90984 for 2178 contacts (-41.8/contact) +
2D Compatibility (PS) -28639 + (NN) -11596 + (LL) 5456
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -130263.0 ( -59.81 by residue)
QMean score : 0.440
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