Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVSVDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDYDRLKDVIATATYAVVFSAIILTVAGVLLAKPLLILLRTPANILDDSTIFLTTLFIGILPMS--LYNGMAAILRALGNSITPLIFLILSSLMNIALDFL-FVVYMDMGVRGAAIATVLSQT-AAAIAVIYYAYRHVPFMRIERAKFKLSTPLLKEMVRIGLPSGLQG-SFISIGNMALQSLINGFGSSVVAAYTAASRIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGITILVQLFARQFLLLFVDSSETEVINIGVSYLLIVSLFYVVVGILFVVRETLRGTGDAMVPLAMGIFELVSRLVIGFV-LSLYIGYVGLWWATPVAWITATILGVWRYKSGAWQKKAVIRRK |
| 4D10 Chain:B ((34-447)) | --VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEAL---------KDAKN---DRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDF-FEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEI--------LAMTNLVSAYQNND--ITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKP-------------------YTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDH------QKRGGARYTALDKWTNQLNSLNQAVVSKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -323903 for 2845 contacts (-113.8/contact) +
2D Compatibility (PS) -40568 + (NN) 899 + (LL) 4416
1D Compatibility (HY) -1600 + (ID) 3350
Total energy: -364106.0 ( -127.98 by residue)
QMean score : 0.207
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