Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLA-EKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEF-WIK--------SDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDE----AYQLK-VA-----DIKG----NKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPV--DYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 3JYF Chain:A ((4-252)) | -----------------------------------------------------AATVDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARA--EVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKAMNTLNYAVGNLG-NHEFNYGLDFLHKALA---GAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFVPPQI-MTWDKANLNGKVTVNDITETARKYIPE-M-RAKGADVVVVVAHSGLSADPYQAMAENSVYYLSQ--VPG-VDAIMFGHAHAVFPGKDF------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25563 for 1796 contacts (-14.2/contact) +
2D Compatibility (PS) -23680 + (NN) -9694 + (LL) 8488
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -58249.0 ( -32.43 by residue)
QMean score : 0.284
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