Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPL-IVQRPQLPTGCEITNIAMMLRYAGKN--VDKVKLAKEMKRHKSNPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKN-MTGTNLAGIKNQLNKKRPVVAWVSKF----H-GFSVHAITITGYDK----NNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY |
1X9Y Chain:A ((228-365)) | -----------------------------------------------------------------------------------------------------------------LKNFKIREQQFD--NSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSE-------QDLP--NCATFPNQMIEYGKSQGRDIHYQEGVPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWNPWDTE------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1X9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36534 for 877 contacts (-41.7/contact) +
2D Compatibility (PS) -13887 + (NN) -8148 + (LL) 8640
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -54629.0 ( -62.29 by residue)
QMean score : 0.540
|
|
|