Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------MDLAIWQIILLVILAACTILDA-----LTLVIGLNFPVITGTLAGI-------IMGDMVLGL---AIGATLQLMVLGVGTYGGASIPDFTTGAIVGTVFAVLSG---------QDAEFAIGLAIPVGLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFI------LNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLG---------VALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED------------------- |
| 4O5J Chain:A ((27-400)) | LKNLNEKYEQLSQYLNQVASLKQSIQNANNIELVNSSLNYLKSFTNNNYNSTTQSPIFNAVQAVITSVLGFWSLYAGNYFTFFVGKKVD--SGQPASVQGNPPFKTIIENCSGIENCAMDQTTYDKMKKLAEDLQAAQTNSATK---GNNLCALSGCAATSNPPNSTVSNALNLAQQLMDLIANTKTAMMWKNIVISGVSNTSGAITSTNYPTQYAVFNNIKAMIPILQQAVTLSQSNHTLSASLQAQATGSQTNPKFAKDIYTFAQNQKQVISYAQDIFNLFNS--IPAEQYKYLEKAYLKIPNAGSTPTNPYRQVVNLNQEVQTIKNNVSYYGNRVDAALSVARDVYNLKSNQAEIVTAYNDAKTLSEEISKLPH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4O5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -268251 for 1936 contacts (-138.6/contact) +
2D Compatibility (PS) -26125 + (NN) 5302 + (LL) 1132
1D Compatibility (HY) 2400 + (ID) 1900
Total energy: -287442.0 ( -148.47 by residue)
QMean score : 0.161
|
|
|