Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEESFFFYMLTIGSLVL---SGVGLAGSFIVSHKPRLGGAMMVAAAIGCTMS------------------------ISIMFLLPIVLLAVGG-LIALINYEEAASVEE----
1ID5 Chain:I ((5-142))
QPLEKIAPYPQAEKGMKRQVIQL------TPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGYDYYVFDKVSSPVSTRMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAVVR
General information:
TITO was launched using:
RESULT:
Template:
1ID5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109103 for 596 contacts (-183.1/contact) +
2D Compatibility (PS) -11164 + (NN) 2684 + (LL) 356
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -121777.0 ( -204.32 by residue)
QMean score : -0.029
(partial model without unconserved sides chains):
PDB file :
Tito_1ID5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ID5-query.scw
PDB file :
Tito_Scwrl_1ID5.pdb
: