Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKITIQEIAKLSGVSVSTVSRVLNNSPSVSAAKRKKIQAIIDEHNYTPSVFARGMVNKQTKNIGVILPDISNPYFISLITQIQKFALDYMFSTILFNTMLAEPDNKNNQHPLTEEDYLKIILEKQVDGLLILGGEIDKEIVPKEYITALNQLNNAIPVVVI--GSKIPELNCLFIERNLKKGVTTLVSHLTALGHKNIGFIGGEAGVKITTYRLESFKEAMTSYQHPVNDDWVVLSDYYTADGYAAMTHLLENSTTLPTALVAINDNVAIGAIRAINDAKLSCPEDIAIVSCDQFMNGDYQTPRLTSMDQHNEYLGKMAILQLISAI-NGQVEPMIINHNPELIIRESCGSKL |
| 1JFS Chain:A ((2-329)) | ----TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAW----NNLEKQRA-----YLSMMAQKRVDGLLVMCSE-----YPEPLLAMLEEYRH-IPMVVMDFGEAKADFTDAVID-NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQIL-SQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -243175 for 2731 contacts (-89.0/contact) +
2D Compatibility (PS) -35307 + (NN) -14669 + (LL) 2128
1D Compatibility (HY) -19200 + (ID) 5350
Total energy: -315573.0 ( -115.55 by residue)
QMean score : 0.557
|
|
|