Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTK-ATETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGVW-LEIEPGKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTGKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEH-FFQKIQDNLQSNTIRF--VTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
| 1Z05 Chain:A ((106-417)) | --LGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEI-DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVK-NLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDP-QGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSC-LATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFY-KQATMPGAALIKQAL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151222 for 2595 contacts (-58.3/contact) +
2D Compatibility (PS) -32845 + (NN) -17561 + (LL) -100
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -222828.0 ( -85.87 by residue)
QMean score : 0.484
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