Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----LEKKKKFRLFDAVLMAVCVVLVVESAAPAAAIGSSQFFWWIALLILFFLPYGLVSAELGTTYDDEGGIYDWVKRAFGRKWGARVAWLYWINYPIWMASLAVLFVEVITQIFPVSFGTPVSILIQLIFVWIVVI------------VSCYP-----VSDSKWILNIAAFC---KVAIMLC----LGVLGIYFAITKGLANDFSGKALLPTFDLESLSFISVILFNFLGFEVVTTLASDMENPKKQIPQAIIYGGILIAFFYLLAAFGMGAAIPTSELSTSGGLIDSFIMLIGGVNPFVIIIGIMFMYTLVANLVSWALGVNYVAMYAAKNKDLPAVFGKTNPKNDMPTGTSILNGIVASVLIVAAPLIPNENIFWAFFALNVVALLGSYILMFPAFLKLRKLDPDRERPFKVPGGKILLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILIGTIVAVIVGEICIWLAGKRKDKGEIKNEND |
| 4P0G Chain:A ((7-435)) | APTALERVQKEG--------VLRVITRNSPATYFQDRNGETGFEYELAKRFAERLG-VELKIETA-DNLDDLYAQLSREGGPALAA--AGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKD--RYYGHVDVLG--YVGAYTFAQHLQQRLPRYESHFKQSGKQLDT---------DWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSEL---PESIKEPDRSWFALAAYNI---GGAHLEDARKMAEKEGLNPNK-----------WLDVKKMLPRLAQ--KQWYAKTRYGYARGGETVHFVQNVRRYYDILT-----WVTQPQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -449121 for 3286 contacts (-136.7/contact) +
2D Compatibility (PS) -41421 + (NN) -1808 + (LL) 4548
1D Compatibility (HY) -4000 + (ID) 3050
Total energy: -494852.0 ( -150.59 by residue)
QMean score : 0.167
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