Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEWEGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF
3ZBH Chain:D ((6-94))
---VIRLTPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSATILEDTDQQIA-----
General information:
TITO was launched using:
RESULT:
Template:
3ZBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -669 for 506 contacts (-1.3/contact) +
2D Compatibility (PS) -9748 + (NN) -1887 + (LL) 140
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -21564.0 ( -42.62 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3ZBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZBH-query.scw
PDB file :
Tito_Scwrl_3ZBH.pdb
: