Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL
2KLC Chain:A ((23-93))
---PKIMKVTVKTP---KEKEEFAVPENSSVQQFKEEISKRFKSH-----TDQLVLIFAGKILKDQDTLSQHGIHDGLTVHL-
General information:
TITO was launched using:
RESULT:
Template:
2KLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47165 for 474 contacts (-99.5/contact) +
2D Compatibility (PS) -7609 + (NN) -3763 + (LL) 692
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -60945.0 ( -128.58 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_2KLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KLC-query.scw
PDB file :
Tito_Scwrl_2KLC.pdb
: