Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKLPPEADYLNDETLEVYENDKKKYDQTNQLITNNSVTILLGDFCYYESAWSSRWRDNRFWIGSKVS
2Z5D Chain:A ((135-165))
---PNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQ---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z5D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12152 for 157 contacts (77.4/contact) +
2D Compatibility (PS) -3380 + (NN) -1789 + (LL) 2388
1D Compatibility (HY) -800 + (ID) 350
Total energy: 8221.0 ( 52.36 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_2Z5D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z5D-query.scw
PDB file :
Tito_Scwrl_2Z5D.pdb
: