Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELIDFKTPIRYIGSDFQENVWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
1SFE Chain:A ((12-176)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAVRYALADCELGRCLVAESERGICAILLGDDDA--TLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69003 for 1269 contacts (-54.4/contact) +
2D Compatibility (PS) -18060 + (NN) -7514 + (LL) 10320
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -97857.0 ( -77.11 by residue)
QMean score : 0.657
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