Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQNEANIMAQFASADAEQAERIFERLNKRKQTESRRSNDK--
1R6R Chain:A ((21-100))
---NRVSTVQQLTKRFSLGML-----QGRGPLKLFMALVAFLRFLTIP---------------------PTAGILKRWGTIKKSKAINVLRGFRKEIGRMLNILNRRRR
General information:
TITO was launched using:
RESULT:
Template:
1R6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3207 for 467 contacts (6.9/contact) +
2D Compatibility (PS) -8096 + (NN) -1671 + (LL) 2808
1D Compatibility (HY) -6000 + (ID) 600
Total energy: -10352.0 ( -22.17 by residue)
QMean score : 0.154
(partial model without unconserved sides chains):
PDB file :
Tito_1R6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R6R-query.scw
PDB file :
Tito_Scwrl_1R6R.pdb
: