Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
3PVL Chain:A ((497-572))
--------------------------VAVNWTGVYFVDEQE-QVLLELSFPEIMAVSSSRGTK-MMAPSFTLATIKGDEYTFTSSNAEDIRDLVVTFLE------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PVL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41944 for 437 contacts (-96.0/contact) +
2D Compatibility (PS) -7408 + (NN) -1134 + (LL) 3452
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -52034.0 ( -119.07 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3PVL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PVL-query.scw
PDB file :
Tito_Scwrl_3PVL.pdb
: